Artemis (DNA Sequence Viewer and Annotation Tool) 12.0 DNASequence Viewer and Annotation Tool. Artemis is a DNAsequence viewer and annotation tool that allows visualisation of sequence features and the results of analyses within the context of the sequence, and its six-frame translation. Artemis is written in Java, reads EMBL or GENBANK format sequences and feature tables, and can work on sequences of any size.Artemis is a free genome viewer and annotation tool that allows visualisation of...
Price: USD $0.00;
File Size: 8458 KB;
Perl Objects for Sequence Analysis 0.8
POSA (Perl Objects for SequenceAnalysis) provides an easy-to-use perl interface to handling raw ABI sequence trace files. For example: fasta can be extracted, sequence contigs can be build and putative SNPs and SBE primers can be easily generated.
Price: USD $0.00;
File Size: 3732 KB;
Platform: Windows, Mac, Linux
DnaSP (DNA Sequence Polymorphism) 5.10.01
Nucleotide polymorphism analysis made easy. DnaSP (DNASequence Polymorphism), is a utility package for the analysis of nucleotide polymorphism from aligned DNAsequence data. DnaSP can estimate several measures of DNAsequence variation within and between populations (in noncoding, synonymous or nonsynonymous sites, or in various sorts of codon positions), as well as linkage disequilibrium, recombination, gene flow and gene conversion...
Sequence Analysis 1.6 Sequence editing, reverse complement, protein translation, ORF finding, secondary structure, composition, isoelectric point, primer design, pairwise comparison, publish layout, sequence reformatting. Fetches sequence entries directly from the NCBI via Accession number or GID. Reads most sequence formats.This (Java) application is a collage of coding projects which I have written over the past several years for various clients in my work as a...
Price: USD $0.00;
Sequencher is the industry standard software for DNAsequenceanalysis. It works with all automated sequencers and is widely known for its lightning-fast contig assembly, short learning curve, user-friendly editing tools, and superb technical support. First released almost 15 years ago, Sequencher is currently used for sequenceanalysis tasks in every major genomic and pharmaceutical company as well as numerous academic and government labs in...
4Peaks Plugin SDK 1.2
Have you ever gotten frustrated with your DNAsequenceanalysis program because it didn't do a few things that you needed it to? Now, if you can code (or convince someone else to code for you), you can make 4Peaks go that extra distance for you. By making a plugin, you can get 4Peaks to send your sequence to websites for analysis, get it to find and highlight sequence features on your trace, or, by integrating AppleScripts into your plugin,...
JCAT (Java Codon Adaptation Tool) 1.0 DNAsequenceanalysis made easy. The CodonAdaptationTool (JCAT) presents a simple method to adapt the Codon Usage to most sequenced prokaryotic organisms and selected eukaryotic organisms. The codon adaptation plays a major role in cases where foreign genes are expressed in hosts and the codon usage of the host differs from that of the organism where the gene stems from. Unadapted codons in the host can for example lead to a minor expression...
AmbiguityRemover 1.0 DNAsequenceanalysis made easy. AmbiguityRemover test protein sequence data for substitutional asymmetry using the technique described in McDonald et al. (1999). Under the neutral model of protein evolution, a comparison of sequences from two species should show equal numbers of substitutions in each direction for each pair of amino acids.The programs available here require a set of aligned homologous pairs of protein sequences from two...
Jnomics was specially designed as a cloud-scale sequenceanalysis suite. The project was built in order to help meet the computational challenges presented by the continuing revolution in massively parallel DNA sequencing technologies.
In total, current worldwide second-generation sequencing capacity exceeds 13 Pbp/year, and continues to increase annually by a factor of five. The storage and analysis of such massive volumes of genomic data...
Price: USD $0.00;
Platform: Windows 3.x, Windows , All
Gene Inspector 1.6.8
Gene Inspector is a unique combination of a versatile electronic laboratory research notebook and a comprehensive sequenceanalysis product. Using GI, the user has the ability to define an entire 'suite of analyses' that can be performed each time they (or anyone in the lab) has a new sequence, and the user can design custom "style sheets" which specify exactly how the output will look. This information can then be saved as a new...
iMethy is a handy, easy to use genome-wide DNA methylation analysis and visualization application based on next generation sequencing.
Firstly, it holds the command-line pipeline to align the bisulfite-treated short read, identify the methylcytosine at CG/CHG/CHH sites, detect the methylation level and annotate the methylcytosine.
Secondly, more importantly and with distinct characteristics, iMethy can serve as a visualization tool to...
Oligomer is a small, simple, Java based application specially designed to help you perform sequenceanalysis with standard and mixed bases.
This tool will also help you find out the physical properties of the sequence, so that you get a complete bio-informatics software.
pDRAW32 is a DNA cloning, analysis and visualization software, help you with DNA cloning, analysis and visualization. pDRAW32 lets you enter a DNA name and coordinates for genetic elements, such as genes, to be plotted on your DNA plots.pDRAW32 lets you "clone" fragments of DNA generated by virtual digestion with restriction enzymes and optionally blunted at one or both ends. Up to 3 fragments may be cloned at a time (can you...
Chromatogram Explorer Lite 3.1.1
View, edit, and convert chromatograms. The DNA Chromatogram Explorer is a Windows Explorer clone dedicated to DNAsequenceanalysis and manipulation. You can view the chromatograms while browsing through folders using its integrated file explorer. With a single click you can trim the low quality bases at the end of your samples.Chromatogram Explorer Lite Features:1. Display samples content as you browse through your folders2. Highlight low...
NoeClone Basic Edition 3.0
NoeClone, your virtual cloning laboratory. NoeClone provides a knowledge-enhanced and comprehensive solution for virtual cloning, gel simulation, plasmid map drawing and sequenceanalysis. NoeClone transforms the complex molecular cloning process into a pleasant working experience. Empowered with versatile functionalities of NoeClone, molecular biologists can truly enjoy the fun of molecular manipulation and clone design in sillico. NoeClone...
Price: USD $29.00;
File Size: 59228 KB;
Platform: Windows XP, Windows, Windows 2000, Mac OSX, Mac, Windows 98, Linux , WinVista,WinVista x64,Win7 x32,Win7 x64,Unix,Linux Console,Linux Gnome,Linux GPL,Linux Open Source,MS-DOS